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9 hours ago by

I have been running the following command to convert SRA files:

fastq-dump -F --gzip --readids --split-files

And I want to transition to fasterq-dump. Which would be the equivalent command? I think it is(given that fasterq-dump doesnt give the option to compress the files):

fasterq-dump -S --include-technical

But I wanted to make sure! Thank you!



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