I am a beginner of bioinformatics.
Today, I am trying to use GEO2R and get the Differential Expression Genes(DEGs) list.
I could get the DEGs list sorted by "p-value".
My question is what kind of test is used in GEO2R.
(student t-test? welch's t-test? DESeq? edgeR? Cuffdiff?)
I would appreciate it if someone could answer.
GEO2R : www.ncbi.nlm.nih.gov/geo/geo2r/