I have previously and recently used WGCNA. I updated R to 3.6.2 and the installation of WGCNA is required and not working.
which gives me this response:
Package which is only available in source form, and may need compilation of C/C++/Fortran: ‘WGCNA’
Do you want to attempt to install these from sources? (Yes/no/cancel) Yes
installing the source package ‘WGCNA’
trying URL 'cran.rstudio.com/src/contrib/WGCNA_1.68.tar.gz'
downloaded 1.1 MB
- installing source package ‘WGCNA’ ...
* package ‘WGCNA’ successfully unpacked and MD5 sums checked
* using staged installation
xcrun: error: invalid active developer path (/Library/Developer/CommandLineTools), missing xcrun at: /Library/Developer/CommandLineTools/usr/bin/xcrun
ERROR: compilation failed for package ‘WGCNA’
- removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/WGCNA’
Warning in install.packages :
installation of package ‘WGCNA’ had non-zero exit status
The downloaded source packages are in
Any help or suggestions is appreciated.