Hello
I am working on WGBS Data. I am using MethylSeekR package. From vignette I can see that I can give my input file using the below mentioned command.
system.file("extdata", "Lister2009_imr90_hg18_chr22.tab",package="MethylSeekR")
As per my understanding is concerned, this extdata will be my input file. My question is
-
in which format (file format) it has to be given?
and
-
what is the command to make this extdata?
Thanks
Shrinka