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3 hours ago by

Hi, I have a few set of genes (about 100-200) which I want to show that are enriched for binding with some transcription factors using ENCODE ChIPseq data. So I can get narrowpeak or bigwig files from ENCODE, however, I want to focus on only the genes in my list (mentioned above) and visualize something similar to CHIPSEEKER visualization (similar to abstract heatmap). If anyone know how to feed the data in Chipseeker (R) or suggest any other tools that can do it, would really help. Thanks.
Best regards,
Jinesh



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