unmapped reads BAM TCGA

0

Hello,

on the TCGA website it says some BAM files may not have the unmapped reads available, how can I figure which BAM files may not have this? Also would I need to convert BAM to FASTQ to access the unmapped reads? If I need to convert to FASTQ, isn't it better to use the FASTQ files available on the TCGA Legacy Archive?


unmapped


BAM


read


TCGA

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