Can anybody how to overcome this error in Cuffmerge
command =
cuffmerge -g /mnt/c/Data/Week4/gencommand_proj4/athal_genes.gtf -p 8 -s /mnt/c/Data/Week4/gencommand_proj4/athal_chr.fa assembly.txt
assembly.txt = /mnt/c/Data/Week4/gencommand_proj4/Day8/transcripts.gtf
/mnt/c/Data/Week4/gencommand_proj4/Day16/transcripts.gtf
[Fri Apr 17 13:24:22 2020] Preparing output location ./merged_asm/
Traceback (most recent call last):
File "/usr/bin/cuffmerge", line 580, in <module>
sys.exit(main())
File "/usr/bin/cuffmerge", line 538, in main
gtf_input_files = test_input_files(transfrag_list_file)
File "/usr/bin/cuffmerge", line 268, in test_input_files
g = open(line,"r")
IOError: [Errno 2] No such file or directory: '/mnt/c/Data/Week4/gencommand_proj4/Day8/transcripts.gtf
I would be very thankful