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2 hours ago by

Hi! I want to import .bgen files in Hail but I need to index them first and I'm having some troubles codifying pseudo-autosomal regions and XY regions in Hail.
I need to use a dictionary for "contig_recoding" in order to solve this (I think).

Does anyone know how to it properly? Thank you very much!

Kind regards,
Catarina

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catarinaglmg10



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