Statistics analysis of assembled genome from PacBio HiFi reads using Hifiasm

1

Hi,

I had consensus reads from a PacBio sequencing. I used the assembler hifiasm to create an assembly on these CCS. I got five .gfa files. I have transformed .gfa file to .fasta contigs using bandage and awk command.

What can be used to get more statistics on the assembly?


ccs


gfa


pacbio


contigs


hifiasm

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