Starting GWAS with Plink

0

hello,

I have thousands of VCF files for a project, each representing a single patient. About 1/7 of these patients are case, and 6/7 are control patients.

I am attempting to run my first GWAS analysis of this data.

However, I'm confused by the tutorial that I'm following on zzz.bwh.harvard.edu/plink/tutorial.shtml

how can I enter in which of the patients are control and case?


GWAS

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