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4 hours ago by

I'm wondering someone could help about the error on bigWigAverageOverBed.
My system is Ubuntu 18.04.4 LTS and bigWigAverageOverbed is v357.

I'm encountering an error with a simple code as below,

bigWigAverageOverBed input.bw INPUT.bed output.tab

which gives me back as

processing chromosomes Segmentation fault (core dumped)

I have three files as INPUT.bed, which I modified by awk command according to their ovelaps with another reference BEDfile. Somehow only one of the three INPUT.bed gives the error as above. Since the size of the one was relatively large (36M), so I tried splitting it but the error doesn't change.

Any help would be really appreciated.



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