I am a beginner in RNA-Seq analysis. I am particularly working on Rice transcriptome using RNA-Seq pipeline.
I have done DESeq2 analysis and have yielded DEG's for rice. I have found the list containing types of IDs
1) Os id 2) ENSRNA___ 3) EPlORYSAT__ and 4) gene- XYZ .
I am confused on what other ids are all about? I am familiar with only the Os Id's
Where from these id's have come? Which step and file has particularly produced it?
Will be grateful if someone can guide me.