Question: Racon polishing script that maps long reads and does racon polishing continuously until no changes are seen

gravatar for zack.saud

2 hours ago by

Has anyone come across a script that does that maps long reads and does racon polishing continuously until no changes are seen? I have Nanopore Long reads and it takes a long time to manually map and then invoke racon. I know the Unicycler assembler had a built in function to racon polish until no further changes were seen, but does anyone have a script that does just that automatically?

Many thanks

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zack.saud20



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