gravatar for suvratha

2 hours ago by

Ulm

Hello,
the question I have is - log to which base is reported when we use test.use="DESeq2" in the FindMarkers() function?

I know the default logFC while using Wilcoxon test in FindMarkers() is reported in the natural log, is this true when we use DESeq2 as well?
I have this doubt as DESeq2 reports FC in log to the base 2 and not natural log.

Thanks
Suvi



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