Pseudocode for gapped BLAST seed extension
I am trying to understand in detail how does the gapped BLAST seed extension DP algorithm works.
Despite searching for days now, I could not find anywhere a pseudocode that would allow implementing this in python.
Not being a C programmer, it would be impossible for me to grasp this from the BLAST source code.
Can anyone help me with this?
Thank you all.
• 10 views