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1 hour ago by

United Kingdom

Amino acids can be similar, but not the same (e.g. positively or negatively charged). This has implications for the effect on the structure of the protein when they are substituted. CLUSTAL implements a colourscheme to depict this (as do many other tools).

You can find information about CLUSTAL's colouring online:

www.jalview.org/help/html/colourSchemes/clustal.html

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1 hour ago
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Joe18k



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