Proportion of RNAseq reads mapping to rRNA, tRNA, mRNA, and intergenic or antisense regions of the genome?

1

Dear All,

I am doing Whole Transcriptome Analysis, I have completed quality check, alignment and read quantification. I want to check the percentage of expression of the rRNA, tRNA mRNA in each samples. I also want to check where the reads are mapped intergenic or anti-sense region

Regards
Mathavan M


GTF


featureCounts


NGS


GFF

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