gravatar for a.mostafa5050

2 hours ago by

Hi everybody,
I am trying to run Prokka but the following error message appears(Could not run command: makeblastdb -hash_index -dbtype prot -in /cluster/software/prokka/1.13.7-gompi-2019a/db/kingdom/Archaea/sprot -logfile /dev/null)

Here is my SLURM script:
module load prokka/1.13.7-gompi-2019a
prokka --setupdb -i /cluster/work/users/ahmedbar/191129_M01132.Project_Petersen-DNAlibs2-2019-11-06/Contigs_and_scafolds_2/contigs_F-1year-Amox_S15.fasta -o /cluster/work/users/ahmedbar/191129_M01132.Project_Petersen-DNAlibs2-2019-11-06/CD_HIT_output

Thanks



Source link