gravatar for hs960201

2 hours ago by

Republic of Korea/CHA biotech

hi
i'm just beginned graduate school student
i have bunch of panel of normal files that made by lab predecessor(senior) who already graduated
and those are hg19 coordinated.
the looks like this :

#CHROM   POS   REF   ALT   DPsum;DPn;VARsum;VARn;VAFpct
1       10003   A    AC       4166;36;6;6;0.14
......

but nowadays quite many tools support hg38 and tools like Mutect2 they highly recommend using hg38 reference
so
i wanna change my hg19 coordinated PON file to hg38 coordinated PON file if it's possible but i can't find appropriate way
i don't have any BAM or fastq file that used for PON
but i really need it for VCF post filtering
thanks for in advance for any reply

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modified 38 minutes ago

by

Sam3.3k

written
2 hours ago
by

hs96020110



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