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2 hours ago by

Hi All,

I was trying to run bwa with paired FASTQ and ran over this problem below. How do I fix this error? Thanks!

[mem_sam_pe] paired reads have different names: "HISEQ2000B:573:C6027ACXX:1:2314:18", "HISEQ2000B:573:C6027ACXX:1:2314:18428:92556"

Command exited with non-zero status 1
        Command being timed: "bwa mem -t 4 -R @RGtID:C6027ACXX:1tPL:illuminatPU:HISEQ2000B:573:C6027ACXX:1tLB:8008286227tSM:26_BDU_BDU98201tDS:26_BDU_BDU98201^8008286227 -M /tmp//Homo_sapiens_assembly38.fasta /tmp//26_BDU_BDU98201^8008286227.HISEQ2000B^573^C6027ACXX^1.r1.fq.gz /tmp//26_BDU_BDU98201^8008286227.HISEQ2000B^573^C6027ACXX^1.r2.fq.gz"

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modified 2 hours ago

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2 hours ago
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MAPK1.7k



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