Orthofinder:How to obtain single copy homologous sequences from result files

orthofinder -fg RESULTS_DIR -M msa -oa

The command described above does not yield a single copy of the homologous gene.

I also have a question here, that is, we use protein sequences for alignment and clustering analysis, and if I finally want to get the corresponding nucleotide sequence, what should I do?

Thanks in advance!


single copy homologous sequences

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