Obtaining read group information from the Fastq file
I am new in the field of computational biology and I am working with few paired end fastq files with the aim of prioritizing genomic variants but I am finding it very hard to understand how to get the read group information from the fastq header.
here are two fastqc headers of paired end samples (whole exome sequence, Illumina)
@SN963:294:C847FACXX:1:1106:1077:2087 1:N:0:AGGCAGAA (File name -DYP26_blood_S3_L001_R1_001.fastq) @SN963:294:C847FACXX:1:1106:1077:2087 2:N:0:AGGCAGAA (File name- DYP26_blood_S3_L001_R2_001.fastq)
will be really great if any one can explain me how to obtain the read group information.
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