I am relatively new to bioinformatics. I am currently a PhD student who works on the data science side of bioinformatics. I currently work with Microarray and RNAseq data but plan on working with other NGS data. I want to be good at what I do and understand the decision making process behind a lot pipelines and analytics.
At the moment I am working on differential expression data analysis (of Microarray data) with fGSEA. I understand that I have enriched ontologies and leading edge genes that are responsible for said enrichments. What I don't understand is what I have to do next. I'm new to writing papers so I don't know what to do. What do I do next to have publishable results.
I understand my question(s) are a bit vague and generic but any help is appreciated!