• What is the difference between multiple docking and ensemble docking?

    I have an article in which two types of multiple protein structures docking are described (multi...

  • Protein Protein Docking

    my protein is glycosylated at 2 residues. I want to include the glycosylation during docking sin...

  • protein protein docking and MD simulation

    Hii i have two proteins one is small peptide and other is receptor protein, i want to do docking ...

  • How To Perform Peptide-Protein Docking

    Hi, could anybody give me an example about how to perform peptide-protein docking: the software ...

  • Are there any softwares to carry out the multiple ligand docking?

    Dear all,

    I was wondering whether there are any software to carry out the multiple ligand dockin...

  • I Want To Add Peg (Polyethylene Glycol) Structure To My 8 Aminoacid Long Peptide Structure

    Hi,

    I formed 8 aminoacid long peptide structures via PyMol. I performed molecular docking. I wil...

  • How to identify the sequence in the receptor to which my peptide of interest bind to?

    Currently, I am analyzing peptide-receptor binding sites using CABS-DOCK program. I am wondering,...

  • short peptide mapping to Multiple seq alignment (MSA)

    Hello all,

    I have a set of short peptides (200) comprising 5-30 amino acids that l have to map (...

  • ab initio modeling reliability and protein-protein docking

    Hi. I have modeled one protein composed of peptide stretches from different proteins. I have used...

  • How to check if a peptide binds to a protein based on QSAR

    To determine whether a peptide binds to protein, for example, you need to model the AMP then see ...

  • I'm predicting the protein-peptide structure. Why is the result different everytime?

    Hi. I am a doctoral student.

    The binding structure is predicted using specific protein and pept...

  • Docking ligand to multiple receptors

    Dear users,
    I have 300 receptors and 2 ligands. I am interested to do docking of these
    two ligand...

  • Multiple Sequence Alignment For Cdnas

    Now I have a collection of sequences that are derived from cDNAs, but most of them are partial. I...

  • How to select an unbound structure for a bound protein from multiple options in protein-protein docking

    I am doing a project on protein-protein docking.
    My objective to test how good a docking algorit...

  • Gene/peptide copy number

    Hello everyone!

    I have a list of ~22,500 predicted peptides from a newly sequenced non-model org...



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