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2 hours ago by

I'm new at bioinformatics and I have fastq files for whole genome sequencing of a bacterial genome. When I make de novo assembly I get hundreds of contigs. How can I get the whole genome assembled? If I want to map such contigs to a reference genome, how can I choose the closest genome? and which tools can I use for mapping. How can I identify plasmids sequences?


2 hours ago


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