Make map file with recombination rate using plink?

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Trying to run germline and they use ped and map as input. They seem to have the 3rd map column for recombination rate not empty the example

if I convert a bfile to ped amd map:

plink --bfile filename --recode --tab --out myfavpedfile

the 3rd column of resulting map file for is all 0. I have not been able to get germline to work and I am starting to suspect it needs this 3rd column of the map file filled with values. How do I do this?


germline


plink

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