gravatar for wiki

2 hours ago by

Hi,
I want to filter variants (called with MuTect2) with VariantRecalibrator and ApplyVQSR GATK tools.

However, I have only one sample, with 90,000 variants called. Would this be enough for GATK VariantRecalibrator and ApplyVQSR tools to apply a good model and properly filter my variants?

I will be grateful for any suggestions 🙂

• link

•

modified 1 hour ago

•

written
2 hours ago
by

wiki • 0



Source link