How to Write Loop For Trimming Every FastQ File Individually

1

I have human Rna-Seq data by reading nanopore. Data has over 1000 .fastq files. I want to trim all fastq files individually. I am using NanoFilt for trimming. All Fastq files are in the directory(not gzip format).

How can I write a loop or command line for trimming all fastq files individually?

I am using Linux Ubuntu 21.04.


Trimming


Nanopore


Fastq


Rna-Seq

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