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35 minutes ago by

Bloomington, IN

You can calculate this using a hypergeometric test, which is also commonly used for GO enrichment. In short, it will calculate the probability of randomly picking 8 CTCF sites without replacement, and having all 8 sites match to your 8 target transcripts.

All of the CTCF binding sites can be accessed from the Ensembl regulation dataset in biomart here.

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