I'm intended to infer Gene Regulatory Network (GRN) using ARACNE algorithm and using gene expression matrix. I already have a gene expression matrix file and a list of TFs. But i'm not able to understand how to import in Cytoscape and draw network using ARACNE. Do i have to draw the GRN using any other software and then use ARACNE or does ARACNE does everything from the scratch?
I'm completely new in this field. Any help would be really appreciated.