gravatar for Manoj

3 hours ago by

United States

Hi,
I have got vcf files from GATK. I have a total of 195 vcf files. Please let me know how to proceed for GWAS analysis. I have a phenotype file. Please suggest any method or workflow.

Phenotype file example:

Samples gender  status
 FA2001 M   affected
 FA2002 M   affected
 FA2003 M   unaffected
 FA2004 F   affected
 FA2006 F   unaffected

link

written
3 hours ago
by

Manoj80



Source link