gravatar for Xylanaser

3 hours ago by

Poland - Warsaw - SGGW/WULS

Hey. Is there quick way (biopython or something) to retrive secondary structure from dssp file?

eg 'HHHHHHHHHHEEEEEEEEEEEECCCCCCCCHHHHHHEEEEEEEEE'

I need to get SS by pdb id and build FASTA like records

>3gja
HHHHHHHHHHEEEEEEEEEEEECCCCCCCCHHHHHHEEEEEEEEE
>3akl
CCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHEEEEEEEEEEEECCCCCCCCHHHHHHEEEEEEEEE
...



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