How to find tandem duplications pattern in a DNA sequence
I have a DNA sequence contains a tandem duplication (the sequence of duplication is unknown) for an unknown times.
Each subsequence has some mutations, suppose repeat unit is A (length is 1~8K ) then the sequence is A1A2A3....An(A1 and An possibly are not complete).
If I want to find out the duplication unit A, how should I do?
• 21 views