15Feb

how to convert ped files to cnv

Posted by: admin Categories: Genetics
Comments Off on how to convert ped files to cnv


  • Cnv List File

    I have a CNV analysis to be done by plink, I have got the allumina data files as PED, MAP and TXT...

  • VCF to binary files

    Hi everyone. I am newbie in bioinformatics, PLINK and bio linux. Now I've CNV, genome, genotyping...

  • How to convert multiple vcf files to a ped file?

    I had 421 vcf files, I want to convert the all vcf files to the ped file (format of plink),

    and ...

  • How to convert plink.raw to map and ped files in any software

    I have a data files contains imputed genotypes with informations in the columns as:

    Family...

  • How To Convert Bam To Ped/Map File

    Can anyone suggest me how to convert a BAM allignment file to a PED and a MAP file format??

    Than...

  • How to convert bfiles(bim/bed/fam) to PED and MAP file back?

    I converted PED and MAP files to bfiles using make-bed option to change the SNP identifiers,
    and...

  • How to convert txt file to ped and map using plink

    I am trying to convert a .txt and b.txt file to a1.ped and b1.map file using plink or R. I have r...

  • convert csv frormat to map and ped file in plink?

    I am new in plink analysis, I have a data from chip 50k for sheep and I want to know how can I ...

  • Latest release of '1000 genomes data'

    Hi all,

    Q1. Does anyone know a database that contains a single PED and MAP file of the latest r...

  • How to convert Plink's ped/map files into nexus format?

    Dear all,
    I need to make a phylogenetic network using unphased Illumina genotyping data stored in...

  • How to merge 23andme samples in Plink? Each .ped/.map file represent a sample.

    I got some 23andme samples and want to analysis them. First I converted these 23andme files into ...

  • How to add trio information to VCF or PED format (to compute Mendel error in Plink)

    I have some VCF files, and a spreadsheet with trio information (child, father and mother IDs). I ...

  • How To Convert A Multisample Vcf To A Format That Can Be Loaded In Haploview?

    How can I convert a multisample vcf file to a format that can be loaded in Haploview?

    I have WGS...

  • PED & MAP file extension

    Hi everyone,

    I'm trying to upload the PED & MAP file (tab-delimited file) into gplink to run...

  • Converting illumina raw genotype data into PLINK PED format

    Hello

    How can I converting illumina raw genotype data into PLINK format?

     

  • Converting PED/MAP files to BAM files

    Hello

    I have PED and MAP files that I want to convert to a BAM file.
    Is that possible?

  • How To Convert The Bed File To Ped File

    I have got a BED file (used in Plink and with .bim and .fam file) which contains Affy 500K data,...

  • multisample BED files to PED conversion

    Hi all,

    I have a set of HLA typed casr/control variant files annotated and with a single tab del...

  • How To Convert Text Files To Haploview Ped-Info Files?

    I have been trying to use the Haploview software. The input files need to be in two formats- ped ...

  • Plink Raw Format To Ped Format

    Hi
    I have ped file in plink raw format (0, 1, 2 of minor allele). I want to convert it to ped fo...

  • Convert Plink .Ped File To Pbat .Ped File

    Hi,

    I have a ped and map file in PLINK. I want to convert them to ped format in FBAT so i can an...

  • How To Convert Raw Gwas Data To Ped And Map File For Plink Analysis.

    I am trying to meta-analysis of GWAS data. But I have a big troble in managing the raw GWAS data....

  • CNV , make GCtype. LRR. BAF files , again

    Hi
    I have three files from a company with following names GCtype, LRR and BAF. But I need to qua...

  • How To Convert Plink Ped(Or Bed) File Format In To Peas Software Format?

    Hi All,

    I need to convert my already existing plink ped file format in to PEAS format. Please he...



    • Source link