How to convert gbk file to roary tool acceptable gff3 format?
I would like to carryout pan-genome analysis using
roary, so I need to convert
gbk files to
gff/gff3 files (must have fasta sequence at the end of each gff files) example file for roary gff format. I am aware that prokka can generate
roary compatible gff3 file format, but the problem is I have large number of datasets downloaded from ncbi. Therefore, I would like to proceed pan-genome analysis with ncbi annotations. Could anyone please suggest me any tool to do the same.
Thanks in advance.
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