• How to parse genebank file using swift for OSX ?

    I am doing programming for around three months and I am writing programs using swift programming ...

  • Pulling Protien Genbank files and All of it's isoforms from NCBI

    I have an R script that can take a list of proteins and returns you all of the genebank files. I ...

  • getting information from NCBI genebank files

    Hi,
    I am interested to know about the presence of a specific protein called "anti restriction" in...

  • Howcomplete STAR annotation with NCBI Genebank

    Hello

    I am working on equine embryos and we did non-oriented paired-end RNA-seq (Illumina, NextS...

  • Genbank File generation

    Hi

    I have a newly sequenced bacterial genome and I want to do SNP analysis among the strains of ...

  • How to convert a genebank file to a gff file

    I have a .gb file from a bacterial genome and I would like to convert in an anotated .gff file. C...

  • The Methods To Determine Mads-Box Gene Families In A Newly Sequenced Genome? I Need The Information About The Gene Family Sequence Of Dna, Cdna, Location On Chrommone,Motif?

    We have sequenced a wild rice genome. However, we can not used it for our research by bioinformat...

  • Amino Acid sequence to Genebank (.gbk)

    Hello,

    I am trying to run a BRIG analysis for a number of specific bacteriophage genes. I have a...

  • creating genebank file using own record entries

    Hello, I would like to create the new genebank file using the results obtained from my analysis. ...

  • Qiime mapping file from genebank data

    Hi all,
    I'm relatively new to bioinformatics, and I think that I might be missing something.
    I'v...

  • Converting gff hints to genbank format for augustus training

    Hi,

    I am trying to convert gff hints to genebank for augustus training using gff2gbSmallDNA.pl s...

  • Creating Table From Fasta File In Python

    I have a fasta file with more than 500 sequences, and from that file I need to build a table, so ...

  • How To Create Genbank File(.Gbk/.Gb) Format From Multi-Fasta Format File?

    I would like to create .gbk file from my Multi-FASTA format files of specific organism.This fasta...

  • converting fasta files to genbank or embl format

    I have 7000 genes and thier proteins as well as  the genome of a bacteria am working on, i want t...

  • How to define several regions in GFF3 file?

    Dear all,

    I am trying to customize a GFF3 file containing features from two distinct genomes. I ...

  • How To Calculate Genome Size From Scaffolds?

    I have a assembly fasta file for all scaffolds of a microbe.
    Can direct count of bases in the...

  • I have a long list of GI and I want their accession number

    Hi, As i explained before, i have a long list of GI from genebank and I want to get their corresp...

  • Searching for a site or program that can do functional annotation not being blast2go or david

    I have a gene list of 13 thousand IDs from genebank and David is not recognizing my list. For som...

  • How to combine Uniprot protein names and STRING interaction table for Cytoscape?

    Hello everybody!

    I'm new in bioinformatics and I'm starting new project. I have a STRING protein...

  • The same location shares different GeneBank Accession in IGV and UCSC?

    I'm now using IGV to visualize genome of C. elegans. But I found that the same locations shares d...

  • fasta to fastq without quality scores

    is it possible to convert fasta to fastq format without quality scores? if not how one can get qu...

  • Artemis, Is It Possible To Compare Genomes Gbk Vs Fasta Format?

    It might be a simple question, but I have been trying to do it and cant find the way to do it, Ho...



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