Hi all,
I had files from small RNA-seq (single end), but when I see in the archive I got R1-R2 f...
I have multiple fastq files for different samples. Example :
S_Rep1_R1.fastq
S_Rep1_R2.fastq
S_Re...
Hi All,
What's your method to check the completeness of the fastq file after the download by fa...
Hi all
I was wondering if there are some exome analysis FASTQ files out there?
Any help will be...
I have **218 fastq files i.e,(109*2),** each of which have files named in the format as following...
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Is there anyway I can split large FASTQ files into small FASTQ files with defined number...
Dear all
I'm new to fastq-grep.
I try to use it on a series of fastq file.
how to specify the ou...
Hi,
For a single sample, i have several paired-end fastq files from four different flowcells. i....
Hey All,
What should I do if I forget to add the option of split-files in fastq-dump when I down...
When I convert bcl to fastq (with bcl2fastq), by default I get several fastq file by sample AND b...
Convert Solid color space fastq in base space fastq
Hi all
I am a beginner in NGS. I downloaded ...
Hi,
I have the following fastq files:
*_L001_R1.fastq,
*_L001_R2.fastq,
*_L002_R1.fastq,
*_L002_...
How to filter sequencing reads in a fastq file by size?
I want to filter a Ribo-Seq fastq file to...
Hi all,
I have a fastq file that I want to filter with seqclean to remove low complexity reads. ...
Hello All,
I want to extract the longest read from a fastq file. I am not aware of any way to do...
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I have subsets of 100 and 500 reads in FASTA and FASTQ formats. How can I split this one ...
Hello everybody. right now I'm trying to assemble the fast q files with reverse and forward read ...
Hi All,
I have a list of biosample identifiers like SAMN01096167, SAMN01096168 and SAMN01096169....
Hi I want to rename multiple file:
Old File Name is like this:
SRR4104645_1.fastq ...
I need help to write a for loop to run Trimmomatic tool for quality trimming of paired end fastq ...
Hi All,
We obtained the “.bax.h5” and “.fastq” files after PacBio sequencing service and I als...
I have over 500 paired fastq files. They have been received from a source where the Sample Iden...
Dear all
how can i convert forward and reverse fastq file to one sra file?
i search a lot but i c...