Question: extract transcript sequence from bam file to know transcript length in control and disease RNA samples

gravatar for priyadhawan11234

2 hours ago by


I am interested in extracting sequence of a transcript from a control and diseased sample. I have RNAseq data available and i am wondering how do people normally go about doing this with RNAseq data ? i want to know the the transcript length in both samples. Is there a way where you can extract the sequence from say BAM/SAM files?

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