Exons Distribution from single cell data.
I was looking at the read counts from my single cell sequencing data through IGV and notice that there are very little reads that mapped onto the last few exons of Ezh2, but a lot of reads that are mapped onto the first few exons.(even after normalizing for exon length) I am using 3' end sequencing so I was expecting alot more reads that are mapped onto the last few exons since that is it the 3' end. Is there a reason why this is the case, or are there any papers that share the distribution of the reads on mapped exons?
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