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3 hours ago by

Hi all,

Im doing GSEA with the clusterProfiler package in R, and I have a question about direction. When Ive done gsea on other platforms there was a column saying whether the gene set was "up" or "down." I don't see this in the gsearesult object. So if the gene set GSE23321_CENTRAL_MEMORY_VS_NAIVE_CD8_TCELL_DN is in the result is that saying genes that are down regulated in memory t-cells vs naive are upregulated in mine or also down regulated?

Thanks!

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3 hours ago
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evcon10



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