different sequencing depths for Input and IP in ChIP-Seq

1

Hi,

I have ChIP-Seq data where my Input sample is sequenced to 15M reads and IP sample to 45M reads. Is read count normalisation a good way to normalise the IP with Input? If not, whats the best way to proceed with these Input and IP samples of different sequencing depths?

Thanks a lot!


depth


ChIP-Seq


sequencing


normalisation

• 48 views



Source link