De novo genome assembly

0

Howdy,

I have recently been tasked as the 'bioinformatics guy" in my lab and am having trouble with a de novo genome assembly of Mother of a Thousand. I am working with Nanopore reads and have ran my reads through CANU. I have all of this great data and am not sure where to go next with my work flow. Do I need a reference genome to use MiniMap2?


De


novo


Assembly


Genome


Minimap2


Mother

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