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3 hours ago by

Israel/LabWorm

I'm using Trim Galore to process RNAseq and in one of the samples in get this error:

Cutadapt terminated with exit signal: '24'. Terminating Trim Galore
run, please check error message(s) to get an idea what went wrong...

This is the code I've used:

../TrimGalore-0.6.4/trim_galore ./data/*fastq.gz -q 33 --nextera --path_to_cutadapt cutadapt --fastqc --fastqc_args "--nogroup --outdir ./fastqc_trimmed/" -o ./trimmed/

I could not find the meaning of the error in Cutadapt docs.. any ideas?

Thanks!

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roy.granit810



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