4 hours ago by
Physiology Research Center, Institute of Basic and Clinical Physiology Sciences, Kerman University of Medical Sciences, Kerman, Iran
I want to find common genes for 4 different diseases, I have 4 microarray datasets with the same platforms (Affymetrix). Which is the best way for the determination of common genes? I merge all datasets and remove batch effects or analysis each dataset individually and then detect common genes?
I would be very pleased if you could guide me.