gravatar for Assa Yeroslaviz

2 hours ago by

Munich

I have found the bigPint package in bioconductor recently and found it very helpful to plot the data for QC reasons.
The vignettes are very good made and the package is very neat, but unfortunately they are all working with edgeR.
Even though it says they can also run with a DESeq object, there is no example of such an analysis.

I was wondering if the authors of this package can also add an example with DESeq2 workflow. Or at least mention what columns of the deseq object are needed in creating the plots.

thanks



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