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1 hour ago by

Brazil

Prokka outputs a very detailed log, it will be the ${prefix}.log file in the output folder. E..g:

grep "Found" ~/projects/annotation/prokka/ngs56.log
 [15:23:01] Found 51 tRNAs
 [15:23:15] Found 7 rRNAs
 [15:25:16] Found 47 ncRNAs.
 [15:25:56] Found 3 CRISPRs
 [15:26:10] Found 2049 CDS
 [15:26:59] Found 892 unique /gene codes.
  



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