gravatar for Mr Locuace

2 hours ago by

Chile

I am trying to use convertf software to convert files from PED to EIGENSTRAT format. I have the following files: a.ped, a.pedsnp and a.pedind. According to the tutorial:

reich.hms.harvard.edu/software/InputFileFormats

I should use this command:

/bin/convertf -p parfile

I have tried different ways of running the command:

convertf a -p par.PED.EIGENSTRAT
convertf -p a par.PED.EIGENSTRAT
convertf -p a.ped a.pedsnp a.pedind par.PED.EIGENSTRAT

However, I get:

parameter file: a
Can't open file
: No such file or directory
fatalx:
can't open a
Aborted (core dumped)

I am also not sure what should be the parfile

Can someone indicate me what is the proper way of running such command?



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