gravatar for mhwaida258

2 hours ago by

Hi ,
I am working on SARs sequence, I made Multible Alignment for the sequences unsing Mafft and the output in clustal format.
My question is how i can extract the conserved sequences from the whole file by python script
I use a python script to count this conserved region by counting number of stars (*) but for but the conserved region in the above line how to tell that in python script ( if you see the * print the previous line in the same position and so on )
Any help
Or suggestion?
Thank you in advance

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