• Process_Exonerate_Gff3.Pl Error

    I am trying to use the script processexonerategff3.pl, which converts exonerate output into gff f...

  • Error in CIRI2 as a circular RNA extracting tool for my data set

    Hi,

    My data set belong to 3 human that have cancer. I trimmed these samples and then align them ...

  • problem in running CIRI2 as a circular RNA extracting tool

    hi,

    I read this artile: "CIRI: an efficient and unbiased algorithm for de novo circular RNA iden...

  • vcftools FORMAT ID error during filtering

     

    I have been using vcftools_0.1.12b (mac OSX 10.9.5) to filter SNP data quite successfully for ...

  • FORMAT 'PL' is not defined in the header, assuming Type=String (bcftools)

    I am trying to use bcftools to fix references on some older VCF files I have, but I keep getting ...

  • Find The Match Entries In The Columns And Print Them Out By Perl

    Hi,
    I have asked this question before , but as Admin said If i want to change my question , I ha...

  • How To Combine Several Perl Scripts Into One?

    Dear all,
    I write several small scripts for sequence analysis, s1.pl, s2.pl s3.pl ect. I have to...

  • LWP error (Bioperl on ubuntu)

    I ran a bioperl script on ubuntu (installed on my laptop not work) and it gives:

    _______________...

  • Vcftools,Vcf-Merge Error

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  • qsub returns "no such file or directory error" for few files.

    Hi,

    I am launched a job script with the "qsub" command ,but it returns a error message after bei...

  • Facing problem while performing circRNA Prediction with CIRI_AS

    I am predicting circRNA in my datasets, while running this command

    perl CIRI_AS_v1.2....

  • BioMart Ensembl Perl API: Attribute 'cdna' not found in dataset

    I am trying to use ensembl's BioMart API to download seqeuences, but it fails on the following qu...

  • error loading gff3 file to chado database

    I used the following command to load annotations from a gff file to chado database:

    gmod_bul...



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