Cannot compile Lumpy-SV.

0

Dear Biostars

I try to download lumpy-sv by using these steps :

git clone --recursive https://github.com/arq5x/lumpy-sv.git

cd lumpy-sv

make

after make
I get that

cd lib/htslib &&
./configure --disable-bz2 --disable-lzma --enable-libcurl

checking for gcc... gcc

checking whether the C compiler works... no

configure: error: in `/home/gnks/Desktop/Temp_yusuf_baran/clincv38_v2/lumpy-sv/lib/htslib':

configure: error: C compiler cannot create executables

See `config.log' for more details

Makefile:74: recipe for target 'htslib' failed

make: *** [htslib] Error 77

Any suggestion?

By the way I try to install
KCCG / ClinSV


structural


KCCG


ClinSV


variation

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updated 26 minutes ago by

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written 2 hours ago by

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